Zhe Ye
Publications
Vero: Can AI Agents Build Formally Verified Software Repositories?
AI agents are increasingly used for programming, but do not provide any guarantee on the correctness of generated code. Verified code generation, in which an agent produces both an implementation and a machine-checked proof of its specification, offers a stronger path toward trustworthy AI-generated software. Existing benchmarks in this direction either focus on individual functions or only evaluate proof generation with provided implementations. It is still an open question whether agents can make coherent implementation and proof choices across real multi-module codebases. To bridge this gap, we introduce Vero, the first benchmark to evaluate joint implementation and proof synthesis at the repository level. Vero contains 43 multi-module instances sourced from real-world repositories spanning Python, Dafny, Verus, and Coq, and covering diverse domains from cryptographic protocols to distributed systems. Each instance consists of a multi-module Lean 4 repository with predetermined API interfaces, manually curated formal specifications, and reference implementations, supporting both proof-only and code-and-proof evaluation modes. To improve benchmark reliability, Vero also includes an audit mechanism where agents are allowed to formally prove unsatisfiability of provided specification or incorrectness of reference code, which surfaces and corrects latent code and specification errors during curation. We evaluate frontier coding-agent configurations with Lean toolchain access. The strongest agent fully solves only 27 of 43 instances and closes no specifications on the hardest repositories. Vero provides a concrete testbed for measuring progress toward repository-scale verified software synthesis, where current agents still fall short. We release the benchmark, curation pipeline, and evaluation harness at https://github.com/sunblaze-ucb/vero.
Intent-aligned Formal Specification Synthesis via Traceable Refinement
Large language models are increasingly used to generate code from natural language, but ensuring correctness remains challenging. Formal verification offers a principled way to obtain such guarantees by proving that a program satisfies a formal specification. However, specifications are frequently missing in real-world codebases, and writing high-quality specifications remains expensive and expertise-intensive. We present VeriSpecGen, a traceable refinement framework that synthesizes intent-aligned specifications in Lean through requirement-level attribution and localized repair. VeriSpecGen decomposes natural language into atomic requirements and generates requirement-targeted tests with explicit traceability maps to validate generated specifications. When validation fails, traceability maps attribute failures to specific requirements, enabling targeted clause-level repairs. VeriSpecGen achieve 86.6% on VERINA SpecGen task using Claude Opus 4.5, improving over baselines by up to 31.8 points across different model families and scales. Beyond inference-time gains, we generate 343K training examples from VeriSpecGen refinement trajectories and demonstrate that training on these trajectories substantially improves specification synthesis by 62-106% relative and transfers gains to general reasoning abilities.